Workflows

There are a few workflows of using OakVar modules.

ov run
ov report
ov gui

As mentioned, there are three workflows of using modules in OakVar.

ov run
ov report
ov gui

ov run

When ov run is called, OakVar imports and executes modules in the following manner.

input
| recognizes input files' format with
| converter modules' check_format function
v
converter module's convert_line function
v
mapper module's map function
| imports annotator modules according to
| -a option
v
annotator modules' annotate function
| import postaggregator modules according to
| -p option as well as default postaggregator
| modules
v
postaggregator modules' annotate function
| import reporter modules according to
| -t option
v
reporter modules' write_preface, write_header, write_table_row functions
|
v
report files

ov report

When ov report is called, OakVar imports and executes modules in the following manner.

annotation database file
| import reporter modules accorging to
| -t option
v
reporter modules' write_preface, write_header, write_table_row functions
|
v
report files

ov gui

Will be discussed later.